๐Ÿฒ
Illumina Infectious Disease Software
Illumina Connected Software
  • ๐Ÿ‘พIllumina Infectious Disease and Microbiology Software
  • DRAGEN Microbial Amplicon
    • โ–ถ๏ธDRAGEN Microbial Amplicon App Documentation
      • ๐ŸŒ€How to start
      • Page
      • ๐ŸงฌCustom reference
        • ๐Ÿ“„Reference BED file format
        • ๐Ÿ“„PCR Primer definition file formats
      • ๐Ÿ“‚Output files
      • ๐Ÿ“–Understanding the BaseSpace Reports
        • ๐Ÿ“„Summary
        • ๐Ÿ“„Sample Report
      • ๐Ÿ’ Pipeline Logic
      • โญSpecial considerations for amplicon detection
      • โ“Frequently Asked Questions (FAQ)
  • DRAGEN Targeted Microbial
    • โ–ถ๏ธDRAGEN Targeted Microbial App Documentation
      • ๐ŸŒ€How to set up and run an analysis
      • ๐ŸงฌCustom genomes and primer sets
        • ๐Ÿ“„Genome definition file formats
        • ๐Ÿ“„Primer definition file formats
      • โš™๏ธApp Settings
      • ๐Ÿ“–Understanding the BaseSpace Reports
        • ๐Ÿ“„Summary Report
        • ๐Ÿ“„Result Reports
      • ๐Ÿ“‚Output files
      • ๐Ÿ’ Pipeline Logic
      • โญSpecial considerations for amplicon sequencing with IMAP protocols
      • โ“Frequently Asked Questions (FAQ)
      • ๐ŸšฉKnown issues
  • DRAGEN Microbial Enrichment Plus
    • โ–ถ๏ธDRAGEN Microbial Enrichment Plus App Documentation
      • ๐ŸŒ€How to set up and run an analysis
        • ๐ŸงฌCustom reference FASTA and BED files
        • ๐Ÿ“„Microorganism Reporting File format
      • ๐Ÿ“‚Output files
        • ๐Ÿ“–Understanding the BaseSpace HTML reports
        • ๐Ÿ“–Report JSON format
      • ๐Ÿ’ Pipeline logic
      • โญTest information
        • ๐Ÿ“„RPIP
        • ๐Ÿ“„UPIP
        • ๐Ÿ“„RVOP/RVEK
        • ๐Ÿ“„VSP
        • ๐Ÿ“„VSP V2
        • ๐Ÿ“„Custom Panel
      • ๐Ÿ•ต๏ธโ€โ™€๏ธScientific evidence
      • โ“Frequently Asked Questions (FAQ)
      • ๐ŸšฉRelease notes
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  • Illumina Respiratory Pathogen ID/AMR Enrichment Panel Kit (RPIP)
  • Illumina Urinary Pathogen ID/AMR Enrichment Panel Kit (UPIP)
  • Illumina Respiratory Virus Oligo Panel / Respiratory Virus Enrichment Kit (RVOP / RVEK)
  • Illumina Viral Surveillance Panel (VSP)
  • Illumina Viral Surveillance Panel V2 (VSP V2)

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  1. DRAGEN Microbial Enrichment Plus
  2. DRAGEN Microbial Enrichment Plus App Documentation

Scientific evidence

PreviousCustom PanelNextFrequently Asked Questions (FAQ)

Last updated 7 months ago

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Illumina Respiratory Pathogen ID/AMR Enrichment Panel Kit (RPIP)

Application note:

Application note:

Technical note:

Illumina Urinary Pathogen ID/AMR Enrichment Panel Kit (UPIP)

Genomics Research Hub (GRH) article:

Data sheet:

UPIP ID Week Scientific Poster:

Illumina Respiratory Virus Oligo Panel / Respiratory Virus Enrichment Kit (RVOP / RVEK)

Application note:

Application note:

Application note:

Illumina Viral Surveillance Panel (VSP)

Illumina Viral Surveillance Panel V2 (VSP V2)

Data sheet:

Data sheet:

โ–ถ๏ธ
๐Ÿ•ต๏ธโ€โ™€๏ธ
Analytical performance of the Respiratory Pathogen ID/AMR Panel
Rapid detection of respiratory pathogens using the MiniSeqโ„ข System
Evaluating reference materials for use with the Illumina Respiratory Pathogen ID/AMR Enrichment Panel Kit: Ensure optimal performance with external controls from commercial vendors
Wastewater AMR surveillance with a broad probe-capture precision metagenomics (PMG) panel
Urinary Pathogen ID/AMR Panel: Highly sensitive, culturefree identification and quantification of common and underrecognized uropathogens
Theoretical Antimicrobial Selection Based on Precision Metagenomics Compared with Standard Urine Culture/Susceptibility: A Reliability and Inter-Rater Agreement Feasibility Analysis
Detection and characterization of respiratory viruses, including SARS-CoV-2, using Illumina RNA Prep with Enrichment
Faster detection of respiratory viruses using the MiniSeqโ„ข Rapid Reagent Kit and Illumina RNA Prep with Enrichment
Surveillance of infectious disease through wastewater sequencing: Detect SARS-CoV-2 variants and other respiratory viruses in the community
Viral Surveillance Panel: Streamlined whole-genome sequencing of high-impact viruses using hybridโ€“capture enrichment
Viral Surveillance Panel v2: Streamlined whole-genome sequencing for high-risk viral surveillance and research